Browse Articles

The authors re-examine the galactic kinematics of relic galaxy NGC 1277, recently identified as dark matter deficient, by reproducing its rotation curve with data from the George and Cynthia Mitchell Spectrograph.

Vibrato, defined as a rapid and subtle oscillation in pitch, is a technique that is commonly used by musicians to add expression and colour to notes. However, on stringed instruments, there are certain notes (open string notes) on which it is impossible to perform the technique. Without vibrato, they can sound angular and unpleasant, especially when juxtaposed against other notes played with vibrato. String players therefore use an alternative to achieve the same vibrato effect on the open string — a technique referred to as “open string vibrato”. While the technique is widely used, it is unknown how much of a physical effect it has on the sound waves produced, if any at all. The purpose of this study is to analyse open string vibrato using a statistical approach to provide evidence to characterize the physical effect of the technique, and then compare it to normal vibrato. We hypothesised that it would have a noticeable and measurable effect on the sound waves produced because of the technique’s widespread usage. To test this, notes, with and without either open string vibrato or normal vibrato, were recorded on the violin. We analyzed the audio recordings using a computational and statistical approach. The results of the study partially agreed with our hypothesis: while the technique has an observable physical effect on the sound waves, the effect is weaker than expected. We concluded that open string vibrato does work, but has quite a subtle effect, and thus should only be used when there is no other option.

Molecules which bind to proteins that aggregate abnormally in neurodegenerative diseases could be promising drugs for these diseases. In this study, Zhang, Wu, Zhang, and Dang simulate the binding behavior of various molecules to screen for candidates which could be promising candidates for drug development.

With growing demands for ethanol, many researchers are turning to Panicum virgatum (switchgrass) as a feedstock of cellulosic ethanol. In this study, Ferris and Gillan examine the germination, biomass, nitrogen, survival, and chlorophyll absorbance of two switchgrass cultivars of grown in competition with Bromus inermis (smooth brome) with two varying levels of nitrogen fertilizer. Results presented indicate that during establishment, competition from other species has a greater effect than nitrogen fertilizer.

Non-nucleoside reverse transcriptase inhibitors (NNRTIs) are allosteric inhibitors that bind to the HIV reverse transcriptase and prevent replication. Indolyl aryl sulfones (IAS) and IAS derivatives have been found to be highly effective against mutant strains of HIV-1 reverse transcriptase. Here, we analyzed molecules designed using aryl sulfone scaffolds paired to cyclic compounds as potential NNRTIs through the computational design and docking of 100 novel NNRTI candidates. Moreover, we explored the specific combinations of functional groups and aryl sulfones that resulted in the NNRTI candidates with the strongest binding affinity while testing all compounds for carcinogenicity. We hypothesized that the combination of an IAS scaffold and pyrimidine would produce the compounds with the best binding affinity. Our hypothesis was correct as the series of molecules with an IAS scaffold and pyrimidine exhibited the best average binding affinity. Additionally, this study found 32 molecules designed in this procedure with higher or equal binding affinities to the previously successful IAS derivative 5-bromo-3-[(3,5-dimethylphenyl)sulfonyl]indole-2-carboxyamide when docked to HIV-1 reverse transcriptase.

Here the authors investigated the impact of player ability versus starting positions in the game of Nim under imperfect play, hypothesizing that player skill becomes the primary determinant of outcomes as pile sizes grow. Through computational simulations and a mathematical model, they demonstrated that favorable starting positions lose their advantage over time and provide key insights to help improve reinforcement learning algorithms in abstract, complex decision-making environments.

The explored the potential of an epitope-based vaccine for Rocio virus using computational methods and M13 bacteriophage technology. Researchers identified 30 promising B- and T-cell epitopes and designed vaccine candidates using both phage display and E. coli expression systems.

Here, recognizing that brain aneurysms pose a severe threat, often misdiagnosed and leading to high mortality, particularly in younger individuals, the authors explored a novel computer-aided engineering approach. They used magnetic resonance angiography images and computational fluid dynamics, to improve aneurysm detection and risk assessment, aiming for more personalized treatment.

Cell segmentation is the task of identifying cell nuclei instances in fluorescence microscopy images. The goal of this paper is to benchmark the performance of representative deep learning techniques for cell nuclei segmentation using standard datasets and common evaluation criteria. This research establishes an important baseline for cell nuclei segmentation, enabling researchers to continually refine and deploy neural models for real-world clinical applications.

The authors employ computational protein design to identify a mini-protein with the potential to enhance binding of the tight junction protein, claudin-5, at the blood-blood barrier with therapeutic potential for neurodegenerative diseases.